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But if you choose to apply Doubling Season first, then 1 counter gets doubled to 2, then Pir adds an additional counter for a total of 3

You're like 75% in on morph, but you've also got some extraneous cards you don't really need to be using, like Ophidian(You're in blue-you'll get better payoff just using a draw spell or something that taps to draw) AwesomeName on Go Go Morphing Wizards 10 years ago Quicksilver Dragon, Dermoplasm, Voidmage Apprentice, Counterspell, Thousand Winds, Caged Sun, Rite of Replication ,Rhystic Study, Patron Wizard, Sigil Tracer, Vesuvan Shapeshifter, Stratus Dancer, Arcanis the Omnipotent, Capsize, Brainstorm, Fact or Fiction, Pongify, Mind Stone, Diviner's Wand, Riptide Laboratory, Coral Atoll, Nykthos, Shrine to Nyx, Halimar Depths are some that might be worth considering.

That is the dilemma

While Magic Arena and Magic Online basically cover all your needs for one-vs-one games, Commander is a whole other story